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The Science of Autonomy program is part of the Office of Naval Research's Naval Air Warcraft and Weapons Department.

The Office of Naval Research's Navy Undersea Research Program (NURP), in collaboration with the National Science Foundation, sponsors science and engineering graduate students pursuing thesis topics in core undersea weaponry technology areas.

The Office of Naval Research's Cyber Security and Complex Software Systems program focuses on developing the fundamental principles and models for the design and construction of complex software systems that meet required assurances for security, safety, reliability and performance.

The Ocean Engineering and Marine Systems program seeks to provide a knowledge framework for advanced engineering methodologies and to accelerate the transition of basic research developments into advanced marine platform systems with applications to unmanned surveillance and monitoring systems for the naval forces and at-sea experimental capabilities for the ocean sciences community.

The aim of the Office of Naval Research's Naval Force Health Protection program is to research and develop innovative capabilities to protect the warfighter, reduce injury risk and improve combat casualty care while also optimizing performance.

The Office of Naval Research's Unmanned Surface Vehicle and Small Combatant Craft program supports the Navy’s interest in advanced sea platform performance, advanced sea platform and autonomy technologies.

The Space Sensor & Effects objective is to develop and experiment with key technology enablers that provide effective and resilient Intelligence, Surveillance, Reconnaissance & Targeting (ISRT) capabilities as affordable and proliferated space-borne sensors for littoral & maritime environments.